HL_9J1M_024

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

AGGUUGAAGACU

Length

12 nucleotides

Bulged bases

9J1M|1|A|U|876, 9J1M|1|A|G|880, 9J1M|1|A|A|881

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|A|A|872
9J1M|1|A|G|873
9J1M|1|A|G|874
9J1M|1|A|U|875
9J1M|1|A|U|876
9J1M|1|A|G|877
9J1M|1|A|A|878
9J1M|1|A|A|879
9J1M|1|A|G|880
9J1M|1|A|A|881
9J1M|1|A|C|882
9J1M|1|A|U|883

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL32

Chain 2

Large ribosomal subunit protein bL34

Chain D

Large ribosomal subunit protein uL3

Chain S

Large ribosomal subunit protein uL22