HL_9J1M_044

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUUGCG

Length

6 nucleotides

Bulged bases

9J1M|1|A|U|1963, 9J1M|1|A|C|1966

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_044 not in the Motif Atlas

Homologous match to HL_7A0S_043

Geometric discrepancy: 0.4635

The information below is about HL_7A0S_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|A|C|1962
9J1M|1|A|U|1963
9J1M|1|A|U|1964
9J1M|1|A|G|1965
9J1M|1|A|C|1966
9J1M|1|A|G|1967

Current chains

Chain A

23S rRNA

Nearby chains