3D structure

PDB id
9J1M (explore in PDB, NAKB, or RNA 3D Hub)
Description
KU13-bond Mycobacterium tuberculosis 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
CUGAAUCG
Length
8 nucleotides
Bulged bases
9J1M|1|A|U|2451
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9J1M|1|A|C|2446
9J1M|1|A|U|2447
9J1M|1|A|G|2448
9J1M|1|A|A|2449
9J1M|1|A|A|2450
9J1M|1|A|U|2451
9J1M|1|A|C|2452
9J1M|1|A|G|2453

Current chains

Chain A
23S rRNA

Nearby chains

Chain C
Large ribosomal subunit protein uL2
Chain X
Large ribosomal subunit protein bL28

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1385 s