HL_9J1M_075

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_075 not in the Motif Atlas

Geometric match to HL_8P9A_129

Geometric discrepancy: 0.1226

The information below is about HL_8P9A_129

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

9J1M|1|a|G|154
9J1M|1|a|G|155
9J1M|1|a|A|156
9J1M|1|a|A|157
9J1M|1|a|A|158
9J1M|1|a|C|159

Current chains

Chain a

16S rRNA

Nearby chains

Chain P

Large ribosomal subunit protein bL19

Chain t

Small ribosomal subunit protein bS20