HL_9J1M_081

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9J1M|1|a|A|343

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_081 not in the Motif Atlas

Geometric match to HL_9DFE_040

Geometric discrepancy: 0.09

The information below is about HL_9DFE_040

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

9J1M|1|a|C|341
9J1M|1|a|U|342
9J1M|1|a|A|343
9J1M|1|a|C|344
9J1M|1|a|G|345
9J1M|1|a|G|346

Current chains

Chain a

16S rRNA

Nearby chains

Chain K

Large ribosomal subunit protein uL14

Chain P

Large ribosomal subunit protein bL19