HL_9J1M_083

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9J1M|1|a|U|420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_083 not in the Motif Atlas

Geometric match to HL_5J7L_030

Geometric discrepancy: 0.2131

The information below is about HL_5J7L_030

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

9J1M|1|a|C|418
9J1M|1|a|U|419
9J1M|1|a|U|420
9J1M|1|a|C|421
9J1M|1|a|G|422
9J1M|1|a|G|423

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

Small ribosomal subunit protein uS3

Chain d

Small ribosomal subunit protein uS4