HL_9J1M_098

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGUCAAC

Length

7 nucleotides

Bulged bases

9J1M|1|a|C|1160

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_098 not in the Motif Atlas

Geometric match to HL_5FJC_003

Geometric discrepancy: 0.2079

The information below is about HL_5FJC_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

9J1M|1|a|G|1157
9J1M|1|a|G|1158
9J1M|1|a|U|1159
9J1M|1|a|C|1160
9J1M|1|a|A|1161
9J1M|1|a|A|1162
9J1M|1|a|C|1163

Current chains

Chain a

16S rRNA

Nearby chains