HL_9J1M_102

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CCUCGG

Length

6 nucleotides

Bulged bases

9J1M|1|a|U|1444

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9J1M_102 not in the Motif Atlas

Geometric match to HL_7OAX_001

Geometric discrepancy: 0.125

The information below is about HL_7OAX_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

9J1M|1|a|C|1442
9J1M|1|a|C|1443
9J1M|1|a|U|1444
9J1M|1|a|C|1445
9J1M|1|a|G|1446
9J1M|1|a|G|1447

Current chains

Chain a

16S rRNA

Nearby chains