HL_9J3T_060

3D structure

PDB id

9J3T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enterococcus faecalis ROOL RNA octamer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAGAAAAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J3T|1|F|G|550
9J3T|1|F|A|551
9J3T|1|F|A|552
9J3T|1|F|G|553
9J3T|1|F|A|554
9J3T|1|F|A|555
9J3T|1|F|A|556
9J3T|1|F|A|557
9J3T|1|F|G|558
9J3T|1|F|C|559

Current chains

Chain F

RNA (580-MER)

Nearby chains

Chain A

ROOL RNA