HL_9JPM_085

3D structure

PDB id

9JPM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5s2U34) and mRNA(AAA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JPM|1|a|G|2303
9JPM|1|a|G|2304
9JPM|1|a|U|2305
9JPM|1|a|C|2306
9JPM|1|a|G|2307
9JPM|1|a|G|2308
9JPM|1|a|A|2309
9JPM|1|a|C|2310
9JPM|1|a|A|2311
9JPM|1|a|U|2312
9JPM|1|a|C|2313

Current chains

Chain a

23S rRNA

Nearby chains

Chain f

50S ribosomal protein L5