HL_9JQ2_030

3D structure

PDB id

9JQ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.61 Å

Loop

Sequence

ACU(A1L4U)UU(12A)A(PSU)

Length

9 nucleotides

Bulged bases

9JQ2|1|V|A1L4U|34

QA status

Modified nucleotides: A1L4U, 12A, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JQ2|1|V|A|31
9JQ2|1|V|C|32
9JQ2|1|V|U|33
9JQ2|1|V|A1L4U|34
9JQ2|1|V|U|35
9JQ2|1|V|U|36
9JQ2|1|V|12A|37
9JQ2|1|V|A|38
9JQ2|1|V|PSU|39

Current chains

Chain V

A-site tRNA-Lys

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain L

30S ribosomal protein S12

Chain X

mRNA

Chain a

Large subunit ribosomal RNA; LSU rRNA