HL_9JQ2_069

3D structure

PDB id

9JQ2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Lys(mcm5h2U34) and mRNA(AAG)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.61 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9JQ2|1|a|A|1535

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9JQ2_069 not in the Motif Atlas

Geometric match to HL_3U4M_001

Geometric discrepancy: 0.1574

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9JQ2|1|a|C|1533
9JQ2|1|a|U|1534
9JQ2|1|a|A|1535
9JQ2|1|a|C|1536
9JQ2|1|a|G|1537
9JQ2|1|a|G|1538

Current chains

Chain a

23S rRNA

Nearby chains