HL_9JSR_018

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

9JSR|1|A|U|646

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9JSR_018 not in the Motif Atlas

Geometric match to HL_9E6Q_022

Geometric discrepancy: 0.2573

The information below is about HL_9E6Q_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

9JSR|1|A|U|641
9JSR|1|A|U|642
9JSR|1|A|A|643
9JSR|1|A|A|644
9JSR|1|A|C|645
9JSR|1|A|U|646
9JSR|1|A|G|647

Current chains

Chain A

23S Ribosomal RNA

Nearby chains