HL_9JSR_019

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

9JSR|1|A|A|781, 9JSR|1|A|G|784

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9JSR_019 not in the Motif Atlas

Homologous match to HL_8B0X_054

Geometric discrepancy: 0.5152

The information below is about HL_8B0X_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

9JSR|1|A|U|779
9JSR|1|A|G|780
9JSR|1|A|A|781
9JSR|1|A|A|782
9JSR|1|A|A|783
9JSR|1|A|G|784
9JSR|1|A|G|785

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34