HL_9K0Z_011

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GACUGAGAUACGGC

Length

14 nucleotides

Bulged bases

9K0Z|1|A|U|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|A|G|320
9K0Z|1|A|A|321
9K0Z|1|A|C|322
9K0Z|1|A|U|323
9K0Z|1|A|G|324
9K0Z|1|A|A|325
9K0Z|1|A|G|326
9K0Z|1|A|A|327
9K0Z|1|A|U|328
9K0Z|1|A|A|329
9K0Z|1|A|C|330
9K0Z|1|A|G|331
9K0Z|1|A|G|332
9K0Z|1|A|C|333

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain T

Small ribosomal subunit protein bS20