HL_9K0Z_029

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGUCAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9K0Z_029 not in the Motif Atlas

Geometric match to HL_8CRE_221

Geometric discrepancy: 0.389

The information below is about HL_8CRE_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.3

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

15

Unit IDs

9K0Z|1|A|G|1146
9K0Z|1|A|G|1147
9K0Z|1|A|U|1148
9K0Z|1|A|C|1149
9K0Z|1|A|A|1150
9K0Z|1|A|A|1151
9K0Z|1|A|C|1152

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain V

Small ribosomal subunit protein uS2