HL_9K0Z_032
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAUCAGCAACGC
- Length
- 12 nucleotides
- Bulged bases
- 9K0Z|1|A|A|1345, 9K0Z|1|A|C|1347
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9K0Z_032 not in the Motif Atlas
- Geometric match to HL_4LFB_030
- Geometric discrepancy: 0.0873
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.2
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9K0Z|1|A|G|1338
9K0Z|1|A|A|1339
9K0Z|1|A|U|1340
9K0Z|1|A|C|1341
9K0Z|1|A|A|1342
9K0Z|1|A|G|1343
9K0Z|1|A|C|1344
9K0Z|1|A|A|1345
9K0Z|1|A|A|1346
9K0Z|1|A|C|1347
9K0Z|1|A|G|1348
9K0Z|1|A|C|1349
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain M
- Small ribosomal subunit protein uS13
- Chain N
- Small ribosomal subunit protein uS14B
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