HL_9K0Z_046

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

9K0Z|1|h|U|285, 9K0Z|1|h|U|288, 9K0Z|1|h|A|289, 9K0Z|1|h|C|290, 9K0Z|1|h|C|291, 9K0Z|1|h|U|301

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|U|283
9K0Z|1|h|G|284
9K0Z|1|h|U|285
9K0Z|1|h|G|286
9K0Z|1|h|A|287
9K0Z|1|h|U|288
9K0Z|1|h|A|289
9K0Z|1|h|C|290
9K0Z|1|h|C|291
9K0Z|1|h|G|292
9K0Z|1|h|G|293
9K0Z|1|h|G|294
9K0Z|1|h|U|295
9K0Z|1|h|A|296
9K0Z|1|h|G|297
9K0Z|1|h|G|298
9K0Z|1|h|G|299
9K0Z|1|h|G|300
9K0Z|1|h|U|301
9K0Z|1|h|U|302
9K0Z|1|h|G|303

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L9