HL_9K0Z_054
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGGGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9K0Z_054 not in the Motif Atlas
- Geometric match to HL_9DFE_015
- Geometric discrepancy: 0.0928
- The information below is about HL_9DFE_015
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 428
Unit IDs
9K0Z|1|h|C|575
9K0Z|1|h|G|576
9K0Z|1|h|G|577
9K0Z|1|h|G|578
9K0Z|1|h|A|579
9K0Z|1|h|G|580
Current chains
- Chain h
- 23S ribosomal RNA
Nearby chains
- Chain z
- Large ribosomal subunit protein uL22
Coloring options: