HL_9K0Z_064

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

9K0Z|1|h|U|942, 9K0Z|1|h|G|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9K0Z_064 not in the Motif Atlas

Geometric match to HL_5J7L_157

Geometric discrepancy: 0.1133

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

9K0Z|1|h|U|941
9K0Z|1|h|U|942
9K0Z|1|h|U|943
9K0Z|1|h|A|944
9K0Z|1|h|G|945
9K0Z|1|h|G|946

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain s

Large ribosomal subunit protein uL15