HL_9K0Z_105

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CACCAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9K0Z_105 not in the Motif Atlas

Geometric match to HL_7A0S_064

Geometric discrepancy: 0.1334

The information below is about HL_7A0S_064

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_12125.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9K0Z|1|h|C|2925
9K0Z|1|h|A|2926
9K0Z|1|h|C|2927
9K0Z|1|h|C|2928
9K0Z|1|h|A|2929
9K0Z|1|h|G|2930

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain u

Large ribosomal subunit protein bL17