HL_9K10_009

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

9K10|1|A|U|285, 9K10|1|A|G|286, 9K10|1|A|U|288, 9K10|1|A|C|291, 9K10|1|A|U|301

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|U|283
9K10|1|A|G|284
9K10|1|A|U|285
9K10|1|A|G|286
9K10|1|A|A|287
9K10|1|A|U|288
9K10|1|A|A|289
9K10|1|A|C|290
9K10|1|A|C|291
9K10|1|A|G|292
9K10|1|A|G|293
9K10|1|A|G|294
9K10|1|A|U|295
9K10|1|A|A|296
9K10|1|A|G|297
9K10|1|A|G|298
9K10|1|A|G|299
9K10|1|A|G|300
9K10|1|A|U|301
9K10|1|A|U|302
9K10|1|A|G|303

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9