HL_9K10_014

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGCCCGUGGAAUC

Length

13 nucleotides

Bulged bases

9K10|1|A|G|474

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|G|469
9K10|1|A|G|470
9K10|1|A|C|471
9K10|1|A|C|472
9K10|1|A|C|473
9K10|1|A|G|474
9K10|1|A|U|475
9K10|1|A|G|476
9K10|1|A|G|477
9K10|1|A|A|478
9K10|1|A|A|479
9K10|1|A|U|480
9K10|1|A|C|481

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L15

Chain Y

50S ribosomal protein L28