HL_9K2Z_003

3D structure

PDB id

9K2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the HfmIscB-omega RNA-target DNA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUAAUGUCCUG

Length

11 nucleotides

Bulged bases

9K2Z|1|B|A|233, 9K2Z|1|B|A|234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K2Z|1|B|C|231
9K2Z|1|B|U|232
9K2Z|1|B|A|233
9K2Z|1|B|A|234
9K2Z|1|B|U|235
9K2Z|1|B|G|236
9K2Z|1|B|U|237
9K2Z|1|B|C|238
9K2Z|1|B|C|239
9K2Z|1|B|U|240
9K2Z|1|B|G|241

Current chains

Chain B

Omega RNA

Nearby chains