HL_9KDT_094
3D structure
- PDB id
- 9KDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- ACCCCCGAGCGGU
- Length
- 13 nucleotides
- Bulged bases
- 9KDT|1|S2|C|1424
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KDT|1|S2|A|1415
9KDT|1|S2|C|1416
9KDT|1|S2|C|1417
9KDT|1|S2|C|1418
9KDT|1|S2|C|1419
9KDT|1|S2|C|1420
9KDT|1|S2|G|1421
9KDT|1|S2|A|1422
9KDT|1|S2|G|1423
9KDT|1|S2|C|1424
9KDT|1|S2|G|1425
9KDT|1|S2|G|1426
9KDT|1|S2|U|1427
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SQ
- Small ribosomal subunit protein uS9
- Chain ST
- Small ribosomal subunit protein eS19
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