HL_9KDU_091

3D structure

PDB id

9KDU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

9KDU|1|S2|U|1372

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KDU|1|S2|G|1367
9KDU|1|S2|U|1368
9KDU|1|S2|U|1369
9KDU|1|S2|A|1370
9KDU|1|S2|A|1371
9KDU|1|S2|U|1372
9KDU|1|S2|U|1373
9KDU|1|S2|C|1374

Current chains

Chain S2

Mus musculus 18S ribosomal RNA

Nearby chains

Chain SR

Small ribosomal subunit protein eS17