HL_9KDW_077
3D structure
- PDB id
- 9KDW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- GACUCUUUCGAGGC
- Length
- 14 nucleotides
- Bulged bases
- 9KDW|1|S2|A|537, 9KDW|1|S2|U|541, 9KDW|1|S2|U|542, 9KDW|1|S2|G|548
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KDW|1|S2|G|536
9KDW|1|S2|A|537
9KDW|1|S2|C|538
9KDW|1|S2|U|539
9KDW|1|S2|C|540
9KDW|1|S2|U|541
9KDW|1|S2|U|542
9KDW|1|S2|U|543
9KDW|1|S2|C|544
9KDW|1|S2|G|545
9KDW|1|S2|A|546
9KDW|1|S2|G|547
9KDW|1|S2|G|548
9KDW|1|S2|C|549
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain Se
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
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