3D structure

PDB id
9KKF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human 40S ribosome complexed with HCV IRES and eIF3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CAGCCG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9KKF|1|S2|C|618
9KKF|1|S2|A|619
9KKF|1|S2|G|620
9KKF|1|S2|C|621
9KKF|1|S2|C|622
9KKF|1|S2|G|623

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SX
40S ribosomal protein S23

Coloring options:

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