HL_9KKF_017
3D structure
- PDB id
- 9KKF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 40S ribosome complexed with HCV IRES and eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 9KKF|1|S2|U|889, 9KKF|1|S2|U|890
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KKF|1|S2|U|885
9KKF|1|S2|A|886
9KKF|1|S2|U|887
9KKF|1|S2|U|888
9KKF|1|S2|U|889
9KKF|1|S2|U|890
9KKF|1|S2|G|891
9KKF|1|S2|U|892
9KKF|1|S2|U|893
9KKF|1|S2|G|894
9KKF|1|S2|G|895
9KKF|1|S2|U|896
9KKF|1|S2|U|897
9KKF|1|S2|U|898
9KKF|1|S2|U|899
9KKF|1|S2|C|900
9KKF|1|S2|G|901
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SL
- 40S ribosomal protein S11
Coloring options: