HL_9KMX_009
3D structure
- PDB id
- 9KMX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bat MERSr-CoV NeoCoV Nsp1 bound to the Human 40S Ribosomal subunit-State1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- CCAAGG
- Length
- 6 nucleotides
- Bulged bases
- 9KMX|1|2|A|464
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9KMX_009 not in the Motif Atlas
- Homologous match to HL_9H3G_087
- Geometric discrepancy: 0.1048
- The information below is about HL_9H3G_087
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61337.7
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 72
Unit IDs
9KMX|1|2|C|462
9KMX|1|2|C|463
9KMX|1|2|A|464
9KMX|1|2|A|465
9KMX|1|2|G|466
9KMX|1|2|G|467
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain G
- Small ribosomal subunit protein eS6
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