HL_9KMZ_019

3D structure

PDB id

9KMZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

AUUCCCAU

Length

8 nucleotides

Bulged bases

9KMZ|1|2|U|1115

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KMZ|1|2|A|1113
9KMZ|1|2|U|1114
9KMZ|1|2|U|1115
9KMZ|1|2|C|1116
9KMZ|1|2|C|1117
9KMZ|1|2|C|1118
9KMZ|1|2|A|1119
9KMZ|1|2|U|1120

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein eS1

Chain b

Small ribosomal subunit protein eS27