HL_9KN5_036

3D structure

PDB id

9KN5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 40S ribosome complexed with HCV IRES, eIF1A and eIF3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCCUUUCUUGGAUCAACC

Length

19 nucleotides

Bulged bases

9KN5|1|zz|U|195, 9KN5|1|zz|U|196, 9KN5|1|zz|U|198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9KN5|1|zz|G|190
9KN5|1|zz|U|191
9KN5|1|zz|C|192
9KN5|1|zz|C|193
9KN5|1|zz|U|194
9KN5|1|zz|U|195
9KN5|1|zz|U|196
9KN5|1|zz|C|197
9KN5|1|zz|U|198
9KN5|1|zz|U|199
9KN5|1|zz|G|200
9KN5|1|zz|G|201
9KN5|1|zz|A|202
9KN5|1|zz|U|203
9KN5|1|zz|C|204
9KN5|1|zz|A|205
9KN5|1|zz|A|206
9KN5|1|zz|C|207
9KN5|1|zz|C|208

Current chains

Chain zz

Chains: zz

Nearby chains

Chain 3a

Eukaryotic translation initiation factor 3 subunit A

Chain 3c

Eukaryotic translation initiation factor 3 subunit C

Chain 3h

Eukaryotic translation initiation factor 3 subunit H