HL_9KZX_071
3D structure
- PDB id
- 9KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9KZX|1|L8|A|82, 9KZX|1|L8|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KZX|1|L8|G|68
9KZX|1|L8|U|69
9KZX|1|L8|G|70
9KZX|1|L8|A|71
9KZX|1|L8|A|72
9KZX|1|L8|U|73
9KZX|1|L8|U|74
9KZX|1|L8|G|75
9KZX|1|L8|C|76
9KZX|1|L8|A|77
9KZX|1|L8|G|78
9KZX|1|L8|G|79
9KZX|1|L8|A|80
9KZX|1|L8|C|81
9KZX|1|L8|A|82
9KZX|1|L8|C|83
9KZX|1|L8|A|84
9KZX|1|L8|U|85
9KZX|1|L8|U|86
9KZX|1|L8|G|87
9KZX|1|L8|A|88
9KZX|1|L8|U|89
9KZX|1|L8|C|90
Current chains
- Chain L8
- 5.8S_ribosomal_RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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