HL_9M0P_032

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UGAACAG

Length

7 nucleotides

Bulged bases

9M0P|1|L5|C|2814

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9M0P_032 not in the Motif Atlas

Homologous match to HL_9AXU_039

Geometric discrepancy: 0.0926

The information below is about HL_9AXU_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9M0P|1|L5|U|2810
9M0P|1|L5|G|2811
9M0P|1|L5|A|2812
9M0P|1|L5|A|2813
9M0P|1|L5|C|2814
9M0P|1|L5|A|2815
9M0P|1|L5|G|2816

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LR

60S ribosomal protein L19