HL_9M0P_065

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

UGUGGUAAUUCUAGA

Length

15 nucleotides

Bulged bases

9M0P|1|S2|U|157, 9M0P|1|S2|U|160, 9M0P|1|S2|U|161

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|S2|U|152
9M0P|1|S2|G|153
9M0P|1|S2|U|154
9M0P|1|S2|G|155
9M0P|1|S2|G|156
9M0P|1|S2|U|157
9M0P|1|S2|A|158
9M0P|1|S2|A|159
9M0P|1|S2|U|160
9M0P|1|S2|U|161
9M0P|1|S2|C|162
9M0P|1|S2|U|163
9M0P|1|S2|A|164
9M0P|1|S2|G|165
9M0P|1|S2|A|166

Current chains

Chain S2

18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24