3D structure

PDB id
9M0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of human 80S ribosome in complex with montanine
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
CUAUUUUGUUGGUUUUCGG
Length
19 nucleotides
Bulged bases
9M0P|1|S2|U|887, 9M0P|1|S2|G|891
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9M0P|1|S2|C|884
9M0P|1|S2|U|885
9M0P|1|S2|A|886
9M0P|1|S2|U|887
9M0P|1|S2|U|888
9M0P|1|S2|U|889
9M0P|1|S2|U|890
9M0P|1|S2|G|891
9M0P|1|S2|U|892
9M0P|1|S2|U|893
9M0P|1|S2|G|894
9M0P|1|S2|G|895
9M0P|1|S2|U|896
9M0P|1|S2|U|897
9M0P|1|S2|U|898
9M0P|1|S2|U|899
9M0P|1|S2|C|900
9M0P|1|S2|G|901
9M0P|1|S2|G|902

Current chains

Chain S2
18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SL
40S ribosomal protein S11

Coloring options:

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