HL_9MDS_025

3D structure

PDB id

9MDS (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOL RNA nanocage (env-120)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAAAAAUUAAUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MDS|1|B|G|500
9MDS|1|B|U|501
9MDS|1|B|A|502
9MDS|1|B|A|503
9MDS|1|B|A|504
9MDS|1|B|A|505
9MDS|1|B|A|506
9MDS|1|B|U|507
9MDS|1|B|U|508
9MDS|1|B|A|509
9MDS|1|B|A|510
9MDS|1|B|U|511
9MDS|1|B|U|512
9MDS|1|B|C|513

Current chains

Chain B

RNA (598-MER)

Nearby chains

Chain H

RNA (598-MER)