3D structure

PDB id
9MEE (explore in PDB, NAKB, or RNA 3D Hub)
Description
GOLLD RNA nanocage (env-38)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GUAGGGAUAC
Length
10 nucleotides
Bulged bases
9MEE|1|C|A|409
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MEE|1|C|G|407
9MEE|1|C|U|408
9MEE|1|C|A|409
9MEE|1|C|G|410
9MEE|1|C|G|411
9MEE|1|C|G|412
9MEE|1|C|A|413
9MEE|1|C|U|414
9MEE|1|C|A|415
9MEE|1|C|C|416

Current chains

Chain C
GOLLD RNA nanocage

Nearby chains

Chain D
Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA

Coloring options:

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