HL_9MEE_057
3D structure
- PDB id
- 9MEE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GOLLD RNA nanocage (env-38)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCUCAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MEE_057 not in the Motif Atlas
- Geometric match to HL_9DFE_059
- Geometric discrepancy: 0.3868
- The information below is about HL_9DFE_059
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_02262.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 36
Unit IDs
9MEE|1|C|U|615
9MEE|1|C|C|616
9MEE|1|C|U|617
9MEE|1|C|C|618
9MEE|1|C|A|619
9MEE|1|C|A|620
9MEE|1|C|G|621
Current chains
- Chain C
- GOLLD RNA nanocage
Nearby chains
- Chain D
- Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
Coloring options: