3D structure

PDB id
9MEE (explore in PDB, NAKB, or RNA 3D Hub)
Description
GOLLD RNA nanocage (env-38)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAACUAAUCCCUC
Length
13 nucleotides
Bulged bases
9MEE|1|J|C|250, 9MEE|1|J|U|251
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MEE|1|J|G|247
9MEE|1|J|A|248
9MEE|1|J|A|249
9MEE|1|J|C|250
9MEE|1|J|U|251
9MEE|1|J|A|252
9MEE|1|J|A|253
9MEE|1|J|U|254
9MEE|1|J|C|255
9MEE|1|J|C|256
9MEE|1|J|C|257
9MEE|1|J|U|258
9MEE|1|J|C|259

Current chains

Chain J
GOLLD RNA nanocage

Nearby chains

Chain I
Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA

Coloring options:

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