HL_9MNC_006

3D structure

PDB id

9MNC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome bound to small molecule SW393071

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CGCGGCGG

Length

8 nucleotides

Bulged bases

9MNC|1|L5|G|135, 9MNC|1|L5|C|136

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MNC|1|L5|C|131
9MNC|1|L5|G|132
9MNC|1|L5|C|133
9MNC|1|L5|G|134
9MNC|1|L5|G|135
9MNC|1|L5|C|136
9MNC|1|L5|G|137
9MNC|1|L5|G|138

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L1

5.8S ribosomal RNA; 5.8S rRNA

Chain LN

Large ribosomal subunit protein eL15

Chain LO

Large ribosomal subunit protein uL29

Chain LP

Large ribosomal subunit protein eL37