3D structure

PDB id
9MNC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human 80S ribosome bound to small molecule SW393071
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
GUUCUCUU(PSU)
Length
9 nucleotides
Bulged bases
9MNC|1|L5|U|2631
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MNC|1|L5|G|2624
9MNC|1|L5|U|2625
9MNC|1|L5|U|2626
9MNC|1|L5|C|2627
9MNC|1|L5|U|2628
9MNC|1|L5|C|2629
9MNC|1|L5|U|2630
9MNC|1|L5|U|2631
9MNC|1|L5|PSU|2632

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LR
Large ribosomal subunit protein eL19
Chain Lm
Large ribosomal subunit protein eL22

Coloring options:

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