HL_9MNC_070
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- GGAGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9MNC_070 not in the Motif Atlas
- Homologous match to HL_4V9F_072
- Geometric discrepancy: 0.1093
- The information below is about HL_4V9F_072
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9MNC|1|L9|G|86
9MNC|1|L9|G|87
9MNC|1|L9|A|88
9MNC|1|L9|G|89
9MNC|1|L9|A|90
9MNC|1|L9|C|91
Current chains
- Chain L9
- 5S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LS
- Large ribosomal subunit protein eL20
- Chain Lz
- Large ribosomal subunit protein uL16
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