HL_9MOR_014

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MOR_014 not in the Motif Atlas

Homologous match to HL_4WF9_015

Geometric discrepancy: 0.0752

The information below is about HL_4WF9_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9MOR|1|1|C|462
9MOR|1|1|G|463
9MOR|1|1|U|464
9MOR|1|1|G|465
9MOR|1|1|A|466
9MOR|1|1|G|467

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

Large ribosomal subunit protein uL4

Chain d

50S ribosomal protein L34