3D structure

PDB id
9MOR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Damaged 70S ribosome with PrfH bound
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
GUG(6MZ)AGAUGC
Length
10 nucleotides
Bulged bases
9MOR|1|1|6MZ|2030, 9MOR|1|1|A|2031, 9MOR|1|1|G|2032
QA status
Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_9MOR_050 not in the Motif Atlas
Homologous match to HL_4WF9_047
Geometric discrepancy: 0.3991
The information below is about HL_4WF9_047
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_78372.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
10

Unit IDs

9MOR|1|1|G|2027
9MOR|1|1|U|2028
9MOR|1|1|G|2029
9MOR|1|1|6MZ|2030
9MOR|1|1|A|2031
9MOR|1|1|G|2032
9MOR|1|1|A|2033
9MOR|1|1|U|2034
9MOR|1|1|G|2035
9MOR|1|1|C|2036

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain R
Large ribosomal subunit protein bL21
Chain b
50S ribosomal protein L32

Coloring options:


Copyright 2026 BGSU RNA group. Page generated in 0.0889 s