HL_9MOR_081

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9MOR|1|2|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MOR_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.3719

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9MOR|1|2|G|462
9MOR|1|2|U|463
9MOR|1|2|U|464
9MOR|1|2|A|465
9MOR|1|2|A|466
9MOR|1|2|U|467
9MOR|1|2|A|468
9MOR|1|2|C|469
9MOR|1|2|C|470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains