HL_9MR4_002

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

GCUCAUAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MR4_002 not in the Motif Atlas

Geometric match to HL_8B0X_031

Geometric discrepancy: 0.1189

The information below is about HL_8B0X_031

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81376.3

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

43

Unit IDs

9MR4|1|2|G|31
9MR4|1|2|C|32
9MR4|1|2|U|33
9MR4|1|2|C|34
9MR4|1|2|A|35
9MR4|1|2|U|36
9MR4|1|2|A|37
9MR4|1|2|A|38
9MR4|1|2|U|39

Current chains

Chain 2

tRNA

Nearby chains

Chain 4

mRNA

Chain K

Small subunit ribosomal RNA; SSU rRNA

Chain UU

uS9