HL_9MR4_032

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG

Length

40 nucleotides

Bulged bases

9MR4|1|5|C|2094, 9MR4|1|5|C|2258, 9MR4|1|5|G|2259, 9MR4|1|5|C|2266, 9MR4|1|5|U|2267, 9MR4|1|5|C|2269

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MR4|1|5|C|2087
9MR4|1|5|A|2088
9MR4|1|5|G|2089
9MR4|1|5|U|2090
9MR4|1|5|C|2091
9MR4|1|5|G|2092
9MR4|1|5|G|2093
9MR4|1|5|C|2094
9MR4|1|5|A|2095
9MR4|1|5|G|2096
9MR4|1|5|A|2097
9MR4|1|5|G|2098
9MR4|1|5|C|2099
9MR4|1|5|G|2100
9MR4|1|5|A|2101
9MR4|1|5|G|2102
9MR4|1|5|A|2103
9MR4|1|5|A|2104
9MR4|1|5|A|2105
9MR4|1|5|G|2106
9MR4|1|5|A|2107
9MR4|1|5|G|2108
9MR4|1|5|A|2109
9MR4|1|5|G|2110
9MR4|1|5|U|2111
9MR4|1|5|G|2112
9MR4|1|5|G|2113
9MR4|1|5|C|2258
9MR4|1|5|G|2259
9MR4|1|5|C|2260
9MR4|1|5|G|2261
9MR4|1|5|G|2262
9MR4|1|5|A|2263
9MR4|1|5|C|2264
9MR4|1|5|G|2265
9MR4|1|5|C|2266
9MR4|1|5|U|2267
9MR4|1|5|A|2268
9MR4|1|5|C|2269
9MR4|1|5|G|2270

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain E

60S ribosomal protein L6

Chain F

uL30

Chain Q

Large ribosomal subunit protein eL18

Chain b

Large ribosomal subunit protein eL29

Chain r

eL28