HL_9MR4_047

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9MR4|1|5|U|2874

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MR4_047 not in the Motif Atlas

Homologous match to HL_9AXU_040

Geometric discrepancy: 0.0654

The information below is about HL_9AXU_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9MR4|1|5|C|2872
9MR4|1|5|U|2873
9MR4|1|5|U|2874
9MR4|1|5|C|2875
9MR4|1|5|G|2876
9MR4|1|5|G|2877

Current chains

Chain 5

28S rRNA

Nearby chains

Chain K

Small subunit ribosomal RNA; SSU rRNA

Chain n

eL41

Chain p

eL43