HL_9MR4_052

3D structure

PDB id

9MR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC: Ribosome nascent chain complex(Oxa1L)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AGAAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9MR4_052 not in the Motif Atlas

Homologous match to HL_9AXU_044

Geometric discrepancy: 0.1153

The information below is about HL_9AXU_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9MR4|1|5|A|3724
9MR4|1|5|G|3725
9MR4|1|5|A|3726
9MR4|1|5|A|3727
9MR4|1|5|A|3728
9MR4|1|5|U|3729

Current chains

Chain 5

28S rRNA

Nearby chains

Chain i

Large ribosomal subunit protein eL36

Chain o

Large ribosomal subunit protein eL42